Code and data associated with Christiansen et al. 2021 "Facilitating population genomics of non-model organisms through optimized experimental design for reduced representation sequencing"

  • Henrik T Christesen (Creator)
  • Franz M. Heindler (Creator)
  • Bart Hellemans (Creator)
  • Quentin Jossart (Creator)
  • Francesca Pasotti (Creator)
  • Henri Robert (Creator)
  • Marie Verheye (Creator)
  • Bruno Danis (Creator)
  • Marc Kochzius (Creator)
  • Frederik Leliaert (Creator)
  • Camille V E Moreau (Creator)
  • Tasnim Patel (Creator)
  • Anton P. Van de Putte (Creator)
  • Ann Vanreusel (Creator)
  • Filip A. M. Volckaert (Creator)
  • Isa Schön (Creator)

Dataset

Abstract

All code and data input and output files (except reference genome and raw sequencing data) needed to reproduce the results of Christiansen et al. 2021 as released on https://github.com/notothen/radpilot alongside journal publication. See published paper: Christiansen, H., Heindler, F.M., Hellemans, B. et al. Facilitating population genomics of non-model organisms through optimized experimental design for reduced representation sequencing. BMC Genomics 22, 625 (2021). https://doi.org/10.1186/s12864-021-07917-3
Date made available30 Jun 2021
PublisherZenodo
Date of data production2021

Format

  • Format
  • zip
  • xml
  • html
  • md
  • csvtsv
  • jpg
  • pdf
  • png

Keywords

  • biodiversity
  • genome scan
  • genotyping by sequencing
  • in silico digestion
  • RADseq
  • southern ocean

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