Microbiologie

2021

Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA

Garcia-Rodriguez, G., Charlier, D., Wilmaerts, D., Michiels, J. & Loris, R., 9 jul 2021, In : Nucleic Acids Research. 49, 12, blz. 7164-7178 15 blz.

Onderzoeksoutput: Article

Open Access

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16 Downloads (Pure)

Bacterial polyhydroxyalkanoate biosynthesis at high temperature from a natural and bioengineering perspective

Matia Sangrador, X., Moanis, R., Hennecke, U. & Peeters, E., 28 jun 2021

Onderzoeksoutput: Master's Thesis

Comparative genomics of DNA-binding transcription factors in archaeal and bacterial organisms

Martinez-Liu, L., Hernandez-Guerrero, R., Rivera-Gomez, N., Martinez-Nuñez, M. A., Escobar-Turriza, P., Peeters, E. & Perez-Rueda, E., 2 jul 2021, In : PLOS ONE. 16, 7, 13 blz., e0254025.

Onderzoeksoutput: Article

Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi

Lofgren, L. A., Nguyen, N. H., Vilgalys, R., Ruytinx, J., Liao, H-L., Branco, S., Kuo, A., LaButti, K., Lipzen, A., Andreopoulos, W., Pangilinan, J., Riley, R., Hundley, H., Na, H., Barry, K., Grigoriev, I. V., Stajich, J. E. & Kennedy, P. G., apr 2021, In : New Phytologist. 230, 2, blz. 774-792 19 blz.

Onderzoeksoutput: Article

3 Citaten (Scopus)

Comprehensive genomic analysis reveals virulence factors and antibiotic resistance genes in Pantoea agglomerans KM1, a potential opportunistic pathogen

Guevarra, R. B., Magez, S., Peeters, E., Chung, M. S., Kim, K. H. & Radwanska, M., jan 2021, In : PLOS ONE. 16, 1, 27 blz., e0239792.

Onderzoeksoutput: Article

2 Citaten (Scopus)

Disentangling the role of ectomycorrhizal fungi in plant nutrient acquisition along a Zn gradient using X-ray imaging

Zhang, K., Tappero, R., Ruytinx, J., Branco, S. & Liao, H-L., 8 aug 2021, In : Science of the Total Environment. 801, 149481.

Onderzoeksoutput: Article

Entropic pressure controls olgomerization of Vibrio cholerae ParD2 antitoxin

Garcia Rodriguez, G., Girardin, Y., Volkov, O., Singh, R. K., Muruganandam, G., Van Dyck, J., Sobott, F., Versées, W., Charlier, D. & Loris, R., 18 jun 2021, In : Acta Crystallographica Section D: Structural Biology (2016- ). 77, Pt 7, blz. 904-920 17 blz.

Onderzoeksoutput: Article

Open Access

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6 Downloads (Pure)

From Macro to Micro: a combined bioluminescence-fluorescence approach to monitor bacterial localization

Soldan, R., Sanguankiattichai, N., Bach-Pages, M., Bervoets, I., Huang, W. E. & Preston, G. M., apr 2021, In : Environmental Microbiology. 23, 4, blz. 2070-2085 16 blz.

Onderzoeksoutput: Article

2 Citaten (Scopus)

Microbial Production of Polyhydroxyalkanoates by Thermophiles (poster)

Moanis, R., Schroyen, B., Hennecke, U., Brancart, J., Van den Brande, N. & Peeters, E., 20 jun 2021, (Unpublished).

Onderzoeksoutput: Poster

MYCELIUM MATTERS: An interdisciplinary exploration of the fabrication and properties of mycelium-based materials

Vanden Elsacker, E., 20 apr 2021, VUBPRESS.

Onderzoeksoutput: PhD Thesis

Open Access

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245 Downloads (Pure)

RNA-Thermometer mediated post-transcriptional regulation of the Heat Shock Response in the thermoacidophilic Crenarchaeon Sulfolobus acidocaldarius

Baes, R. & Peeters, E., 20 jun 2021.

Onderzoeksoutput: Poster

The biology of thermoacidophilic archaea from the order Sulfolobales

Lewis, A. M., Recalde, A., Bräsen, C., Counts, J. A., Nussbaum, P., Bost, J., Schocke, L., Shen, L., Willard, D. J., Quax, T. E. F., Peeters, E., Siebers, B., Albers, S-V. & Kelly, R. M., 1 jul 2021, In : FEMS Microbiology Reviews. 45, 4

Onderzoeksoutput: Article

3 Citaten (Scopus)

2020

A comprehensive framework for the production of mycelium-based lignocellulosic composites

Elsacker, E., Vandelook, S., Van Wylick, A., Ruytinx, J., De Laet, L. & Peeters, E., 10 jul 2020, In : Science of the Total Environment. 725, 138431.

Onderzoeksoutput: Article

Open Access

Bestand

11 Citaten (Scopus)

232 Downloads (Pure)

Activation of the Cell Wall Stress Response in Pseudomonas aeruginosa Infected by a Pf4 Phage Variant

Tortuel, D., Tahrioui, A., Rodrigues, S., Cambronel, M., Boukerb, A. M., Maillot, O., Verdon, J., Bere, E., Nusser, M., Brenner-Weiss, G., David, A., Azuama, O. C., Feuilloley, M. G. J., Orange, N., Lesouhaitier, O., Cornelis, P., Chevalier, S. & Bouffartigues, E., nov 2020, In : Microorganisms. 8, 11, blz. 1-20 20 blz., 1700.

Onderzoeksoutput: Article

Defining heat shock response for the thermoacidophilic model crenarchaeon Sulfolobus acidocaldarius

Baes, R., Lemmens, L., Mignon, K., Carlier, M. & Peeters, E., 19 jun 2020, In : Extremophiles. 24, blz. 681–692 12 blz.

Onderzoeksoutput: Article

DNA-Binding and Transcription Activation by Unphosphorylated Response Regulator AgrR From Cupriavidus metallidurans Involved in Silver Resistance

Ali, M. M., Provoost, A., Mijnendonckx, K., Van Houdt, R. & Charlier, D., 17 jul 2020, In : Frontiers in Microbiology. 11, 17 blz., 1635.

Onderzoeksoutput: Article

4 Citaten (Scopus)

Extensive in vivo screening of uncharacterized Lrp-type transcriptional regulators for the development of biosensors

Bernauw, A., Ryssegem, F., Bervoets, I. & Peeters, E., 2 nov 2020.

Onderzoeksoutput: Poster

Fungal heavy metal adaptation through single nucleotide polymorphisms and copy-number variation

Bazzicalupo, A. L., Ruytinx, J., Ke, Y-H., Coninx, L., Colpaert, J. V., Nguyen, N. H., Vilgalys, R. & Branco, S., 27 okt 2020, In : Molecular Ecology. 29, 21, blz. 4157-4169 13 blz.

Onderzoeksoutput: Article

5 Citaten (Scopus)

Membrane-Interactive Compounds From Pistacia lentiscus L. Thwart Pseudomonas aeruginosa Virulence

Tahrioui, A., Ortiz, S., Azuama, O. C., Bouffartigues, E., Benalia, N., Tortuel, D., Maillot, O., Chemat, S., Kritsanida, M., Feuilloley, M., Orange, N., Michel, S., Lesouhaitier, O., Cornelis, P., Grougnet, R., Boutefnouchet, S. & Chevalier, S., 26 mei 2020, In : Frontiers in Microbiology. 11, 1068.

Onderzoeksoutput: Article

10 Citaten (Scopus)

Microbial community structure and dynamics during radioactive waste disposal

Giménez del Rey, F. J., Mijnendonckx, K. & Peeters, E., 13 nov 2020. 1 blz.

Onderzoeksoutput: Poster

Bestand

4 Downloads (Pure)

Phosphorylation of the acyl-CoA binding pocket of the FadR transcription regulator in Sulfolobus acidocaldarius

Maklad, H. R., Gutierrez, G. J., Esser, D., Siebers, B. & Peeters, E., aug 2020, In : Biochimie. 175, blz. 120-124 5 blz.

Onderzoeksoutput: Article

2 Citaten (Scopus)

Putting an end to the Pseudomonas aeruginosa IQS controversy

Cornelis, P., feb 2020, In : MicrobiologyOpen. 9, 2, e962.

Onderzoeksoutput: Article

16 Citaten (Scopus)

Tackling Pseudomonas aeruginosa Virulence by Mulinane-Like Diterpenoids from Azorella atacamensis

Azuama, O. C., Ortiz, S., Quirós-Guerrero, L., Bouffartigues, E., Tortuel, D., Maillot, O., Feuilloley, M., Cornelis, P., Lesouhaitier, O., Grougnet, R., Boutefnouchet, S., Wolfender, J-L., Chevalier, S. & Tahrioui, A., 2 dec 2020, In : Biomolecules. 10, 12, blz. 1-25 25 blz., 1626.

Onderzoeksoutput: Article

3 Citaten (Scopus)

The events that may contribute to subgingival dysbiosis: a focus on the interplay between iron, sulfide and oxygen

Chathoth, K., Martin, B., Cornelis, P., Yvenou, S., Bonnaure-Mallet, M. & Baysse, C., 1 jul 2020, In : FEMS Microbiology Letters. 367, 14

Onderzoeksoutput: Article

1 Citaat (Scopus)

The Temperature-Regulation of Pseudomonas aeruginosa cmaX-cfrX-cmpX Operon Reveals an Intriguing Molecular Network Involving the Sigma Factors AlgU and SigX

Bouffartigues, E., Si Hadj Mohand, I., Maillot, O., Tortuel, D., Omnes, J., David, A., Tahrioui, A., Duchesne, R., Azuama, C. O., Nusser, M., Brenner-Weiss, G., Bazire, A., Connil, N., Orange, N., Feuilloley, M. G. J., Lesouhaitier, O., Dufour, A., Cornelis, P. & Chevalier, S., 21 okt 2020, In : Frontiers in Microbiology. 11, 14 blz., 579495.

Onderzoeksoutput: Article

3 Citaten (Scopus)

Traditional Chinese Medicine Tanreqing Inhibits Quorum Sensing Systems in Pseudomonas aeruginosa

Yang, W., Wei, Q., Tong, Q., Cui, K., He, G., Lin, L., Ma, L. Z., Cornelis, P. & Wang, Y., 17 dec 2020, In : Frontiers in Microbiology. 11, 18 blz., 517462.

Onderzoeksoutput: Article

1 Citaat (Scopus)

2019

A script for initiating molecular biology studies with non-conventional yeasts based on Saccharomycopsis schoenii

Kayacan, Y., Griffiths, A. M. & Wendland, J., dec 2019, In : Microbiological Research. 229, 126342.

Onderzoeksoutput: Article

1 Citaat (Scopus)

A TetR-family transcription factor regulates fatty acid metabolism in the archaeal model organism Sulfolobus acidocaldarius

Wang, K., Sybers, D., Maklad, H. R., Lemmens, L., Lewyllie, C., Zhou, X., Schult, F., Bräsen, C., Siebers, B., Valegård, K., Lindås, A-C. & Peeters, E., 4 apr 2019, In : Nature Communications. 10, 1, 16 blz., 1542.

Onderzoeksoutput: Article

Open Access

17 Citaten (Scopus)

Characterization of a bacterial-like FadR transcription factor involved in fatty acid metabolism in the archaeal model organism Sulfolobus acidocaldarius

Sybers, D., Lemmens, L., Wang, K., Zhou, X., Shen, L., Brasen, C., Siebers, B., Lindas, A-C. & Peeters, E., 1 feb 2019.

Onderzoeksoutput: Unpublished abstract

Competitive Repression of the artPIQM Operon for Arginine and Ornithine Transport by Arginine Repressor and Leucine-Responsive Regulatory Protein in Escherichia coli

Torres Montaguth, O. E., Bervoets, I., Peeters, E. & Charlier, D., jul 2019, In : Frontiers in Microbiology. 10, JULY, 14 blz., 1563.

Onderzoeksoutput: Article

Open Access

7 Citaten (Scopus)

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

Bervoets, I. & Charlier, D., 1 mei 2019, In : FEMS Microbiology Reviews. 43, 3, blz. 304-339 36 blz.

Onderzoeksoutput: Scientific review

Open Access

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38 Citaten (Scopus)

134 Downloads (Pure)

Editorial overview: Tissue, cell and pathway engineering

Peeters, E. & De Mey, M., okt 2019, In : Current Opinion in Biotechnology. 59, blz. iii-v 3 blz.

Onderzoeksoutput: Editorial

Extracellular DNA release, quorum sensing, and PrrF1/F2 small RNAs are key players in Pseudomonas aeruginosa tobramycin-enhanced biofilm formation

Tahrioui, A., Duchesne, R., Bouffartigues, E., Rodrigues, S., Maillot, O., Tortuel, D., Hardouin, J., Taupin, L., Groleau, M-C., Dufour, A., Déziel, E., Brenner-Weiss, G., Feuilloley, M., Orange, N., Lesouhaitier, O., Cornelis, P. & Chevalier, S., 1 dec 2019, In : npj biofilms and microbiomes. 5, 1, 15.

Onderzoeksoutput: Article

Open Access

16 Citaten (Scopus)

Extracytoplasmic function sigma factors in Pseudomonas aeruginosa

Chevalier, S., Bouffartigues, E., Bazire, A., Tahrioui, A., Duchesne, R., Tortuel, D., Maillot, O., Clamens, T., Orange, N., Feuilloley, M. G. J., Lesouhaitier, O., Dufour, A. & Cornelis, P., jul 2019, In : Biochimica et Biophysica Acta Gene Regulatory Mechanisms. 1862, 7, blz. 706-721 16 blz.

Onderzoeksoutput: Scientific review

23 Citaten (Scopus)

Fatty acid degradation in Sulfolobus acidocaldarius

Zhou, X., Christian, S., Sybers, D., Wang, K., Peeters, E., Lindås, A-C., Brasen, C. & Siebers, B., mrt 2019, (Submitted).

Onderzoeksoutput: Unpublished abstract

Fatty acid degradation in Sulfolobus acidocaldarius

Zhou, X., Schmerling, C., Sybers, D., Wang, K., Peeters, E., Lindås, A-C., Brasen, C. & Siebers, B., mrt 2019.

Onderzoeksoutput: Poster

Genetic Tool Development For a Thermoacidophilic Archaeon

Sybers, D. & Peeters, E., 2 sep 2019.

Onderzoeksoutput: Poster

Genetic Tool Development For Sulfolobus acidocaldarius, a Thermoacidophilic Archaeon

Sybers, D., Swinnen, J. & Peeters, E., 18 okt 2019, (Unpublished).

Onderzoeksoutput: Poster

Genetic tool development for the hyperthermoacidophilic archaeon Sulfolobus acidocaldarius

Sybers, D. & Peeters, E., 3 jun 2019.

Onderzoeksoutput: Poster

Genomic and Transcriptomic Changes that Mediate Increased Platinum Resistance in Cupriavidus metallidurans

Ali, M. M., Provoost, A., Maertens, L., Leys, N., Monsieurs, P., Charlier, D. & Houdt, R. V., 18 jan 2019, In : Genes. 10, 1, 21 blz., 63.

Onderzoeksoutput: Article

Open Access

5 Citaten (Scopus)

Heat shock response in the thermoacidophilic archaeon Sulfolobus acidocaldarius: transcriptional regulation of heat shock proteins and transcription factors

Baes, R., Lemmens, L. & Peeters, E., 21 jul 2019.

Onderzoeksoutput: Poster

Heat shock response in the thermoacidophilic archaeon Sulfolobus acidocaldarius: transcriptional regulation of heat shock proteins and transcription factors (BSM)

Baes, R., Lemmens, L. & Peeters, E., 18 okt 2019.

Onderzoeksoutput: Poster

Heat shock response in the thermoacidophilic archaeon Sulfolobus acidocaldarius: transcriptional regulation of heat shock proteins and transcription factors (GRS)

Baes, R., Lemmens, L. & Peeters, E., 20 jul 2019.

Onderzoeksoutput: Poster

Host Peptidic Hormones Affecting Bacterial Biofilm Formation and Virulence

Lesouhaitier, O., Clamens, T., Rosay, T., Desriac, F., Louis, M., Rodrigues, S., Gannesen, A., Plakunov, V. K., Bouffartigues, E., Tahrioui, A., Bazire, A., Dufour, A., Cornelis, P., Chevalier, S. & Feuilloley, M. G. J., 2019, In : Journal of Innate Immunity. 11, 3, blz. 227-241 15 blz.

Onderzoeksoutput: Scientific review

Open Access

11 Citaten (Scopus)

Mechanical, physical and chemical characterisation of mycelium-based composites with different types of lignocellulosic substrates

Elsacker, E., Vandelook, S., Brancart, J., Peeters, E. & De Laet, L., 22 jul 2019, In : PLoS ONE. 14, 7, 20 blz., e0213954.

Onderzoeksoutput: Article

Open Access

Bestand

21 Citaten (Scopus)

138 Downloads (Pure)

Mechanical, physical and chemical characterization of mycelium-based composites with different types of lignocellulosic substrates

Vanden Elsacker, E., Vandelook, S., Brancart, J., Peeters, E. & De Laet, L., 7 mrt 2019, Biorxiv, 24 blz.

Onderzoeksoutput: Working paper

Mycelium-based materials at the dawn of the Anthropocene

Vanden Elsacker, E., De Laet, L. & Peeters, E., jul 2019, Structures and Architecture - Bridging the Gap and Crossing Borders: Proceedings of the Fourth International Conference on Structures and Architecture (ICSA 2019). CRC Press, Taylor & Francis, Boca Raton, blz. 1083-1090

Onderzoeksoutput: Conference paper

Open Access

1 Citaat (Scopus)