Projecten per jaar
Persoonlijk profiel
Expertise
Structural Bioinformatics and computational biology
- Prediction of biophysical characteristics of proteins from their sequence
- Effect of amino acid variants on proteins and organisms
Computational aspects of Nuclear Magnetic Resonance (NMR)
- Statistical analysis of NMR data in relation to protein structure
- Structure determination of proteins from experimental NMR data
Opleiding / Academische kwalificatie
Chemistry, Ph.D., Ghent University
1 dec 1992 → 19 dec 1996
Externe posities
VUB director, Interuniversity Institute of Bioinformatics in Brussels
apr 2014 → …Maitre d'enseignement, Université libre de Bruxelles
2011 → …Scientific officer (NMR), European Bioinformatics Institute
1 okt 2001 → 30 sep 2010Research Fellow, Biotechnology Research Institute, National Research Council, Montreal
1 jan 2000 → 31 aug 2001Postdoctoral researcher, Université libre de Bruxelles
1 jan 1999 → 31 dec 1999Postdoctoral researcher, Biotechnology Research Institute, National Research Council, Montreal
1 jan 1997 → 31 dec 1998Vingerafdruk
Verdiep u in de onderzoeksgebieden waarop Wim Vranken actief is. Deze onderwerplabels komen uit het werk van deze persoon. Samen vormen ze een unieke vingerafdruk.
- 1 Soortgelijke profielen
Netwerk
Recente externe samenwerking op landen-/regioniveau. Duik in de details door op de stippen te klikken of
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IOF3022: IOF GEAR: Artificial Intelligence Lab
Nowe, A., De Boer, B., Bogaerts, B., Beuls, K., Loeckx, J., Wiggins, G., Lenaerts, T., Vranken, W., Libin, P., Dooms, A., Barbé, K., Ginis, V., Verboven, S. & Van Droogenbroeck, F.
1/01/22 → 31/12/26
Project: Toegepast
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EUAR56: Horizon 2020: HosmartAI: Ziekenhuis Slimme ontwikkeling op basis van AI
Vranken, W., Schoors, D., De Canck, H. & Vandemeulebroucke, J.
1/01/21 → 31/05/24
Project: Fundamenteel
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OZR3877: Horizon 2020: HosmartAI: Ziekenhuis Slimme ontwikkeling op basis van AI (OZR EU BONUS)
1/01/21 → 31/05/24
Project: Fundamenteel
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OZR3719: Bilateral cooperation within the framework of a joint doctoral project: benchfee for joint PhD VUB - UGent, DIXIT Bhawna
27/10/20 → 26/10/24
Project: Fundamenteel
Onderzoeksoutput
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b2bTools: online predictions for protein biophysical features and their conservation
Kagami, L. P., Orlando, G., Raimondi, D., Ancien, F., Dixit, B., Gavaldá-García, J., Ramasamy, P., Roca-Martínez, J., Tzavella, K. & Vranken, W., 31 mei 2021, In : Nucleic Acids Research. 49, W1, blz. W52-W59 8 blz.Onderzoeksoutput: Article
Open AccessBestand34 Downloads (Pure) -
b2bTools: Online predictions for protein biophysical features and their conservation
Kagami, L. P., Gavalda Garcia, J., Roca Martinez, J. & Vranken, W., 15 jun 2021.Onderzoeksoutput: Poster
Open Access -
Computational resources for identifying and describing proteins driving liquid-liquid phase separation
Pancsa, R., Vranken, W. & Mészáros, B., 2 sep 2021, In : Briefings in Bioinformatics. 22, 5, bbaa408.Onderzoeksoutput: Article
Open Access9 Citaten (Scopus) -
Critical assessment of protein intrinsic disorder prediction
CAID Predictors & DisProt Curators, mei 2021, In : Nature Methods. 18, 5, blz. 472-481 10 blz.Onderzoeksoutput: Article
Open Access22 Citaten (Scopus) -
Encore Abstract: Interpreting a Black-Box Predictor to Gain Insights into Early Folding Mechanisms
Grau, I., Nowé, A. & Vranken, W., 2021, blz. 674-676. 3 blz.Onderzoeksoutput: Unpublished abstract
Open Access
Activiteiten
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Vrije Universiteit Amsterdam (Externe Organisatie)
Wim Vranken (Examiner)7 jan 2021Activiteit: Membership of peer-review panel or committee
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Leveraging the biophysical context of amino acid residues to understand protein behaviour
Wim Vranken (Speaker)13 feb 2020Activiteit: Talk or presentation at a conference
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ELIXIR IDP community (Externe Organisatie)
Wim Vranken (Chair)12 aug 2020Activiteit: Membership of public/government advisory/policy group or panel
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Intrinsically disordered proteins and phase separation, lecture and practical
Wim Vranken (Speaker)30 jan 2020Activiteit: Talk or presentation at a workshop/seminar
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MSCA-IDPfun & ELIXIR All Hands Meeting
Tamas Lazar (Organiser), Peter Tompa (Organiser), Wim Vranken (Organiser), Silvio C E Tosatto (Organiser), Damiano Piovesan (Organiser), Marco Necci (Organiser), Marco Carraro (Organiser)8 apr 2020Activiteit: Participating in or organizing an event at an external academic organisation
Scriptie
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Exploring the conformations and interactions in peptides with quantum mechanical methodology
Auteur: Alonso Giner, M., De Proft, F., Vranken, W., Oomen, J. & Ballet, S., feb 2017Begeleider: Alonso Giner, M. (Promotor), De Proft, F. (Promotor), Vranken, W. (Promotor) & Ballet, S. (Jury)
Scriptie/masterproef: Master's Thesis
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Identification and characterization of putative transcriptional regulators in archaea
Auteur: Donvil, L., Peeters, E. & Vranken, W., 10 sep 2018Begeleider: Orlando, G. (Advisor), de Buyl, S. (Jury) & De Greve, H. (Jury)
Scriptie/masterproef: Master's Thesis
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Self-labeling Grey-Box Model: An Interpretable Semi-Supervised Classifier
Auteur: Grau, I., 9 okt 2020Begeleider: Nowe, A. (Promotor), García Lorenzo, M. M. (Externe persoon) (Co-promotor), Signer, B. (Jury), Vranken, W. (Jury), Lenaerts, T. (Jury), Van Dooren, S. (Jury), Vanhoof, K. (Externe persoon) (Jury) & Cornelis, C. (Externe persoon) (Jury)
Scriptie/masterproef: Doctoral Thesis
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The effect of genome variation on human proteins: understanding variants and improving their deleteriousness prediction through extensive contextualisation
Auteur: Raimondi, D. & Vranken, W., 5 mei 2017Begeleider: Lenaerts, T. (Externe persoon) (Promotor), Vranken, W. (Promotor) & Lenaerts, T. (Promotor)
Scriptie/masterproef: Doctoral Thesis
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The role of dynamics in emergent protein properties
Auteur: Orlando, G., Vranken, W. & Lenaerts, T., 23 mei 2019Begeleider: Lenaerts, T. (Promotor) & Vranken, W. (Promotor)
Scriptie/masterproef: Doctoral Thesis