Projecten per jaar
Persoonlijk profiel
Expertise
Structural Bioinformatics and computational biology
- Prediction of biophysical characteristics of proteins from their sequence
- Effect of amino acid variants on proteins and organisms
Computational aspects of Nuclear Magnetic Resonance (NMR)
- Statistical analysis of NMR data in relation to protein structure
- Structure determination of proteins from experimental NMR data
Opleiding / Academische kwalificatie
Chemistry, Ph.D., Ghent University
1 dec 1992 → 19 dec 1996
Externe posities
VUB director, Interuniversity Institute of Bioinformatics in Brussels
apr 2014 → …Maitre d'enseignement, Université libre de Bruxelles
2011 → …Scientific officer (NMR), European Bioinformatics Institute, Hinxton
1 okt 2001 → 30 sep 2010Research Fellow, Biotechnology Research Institute, National Research Council, Montreal
1 jan 2000 → 31 aug 2001Postdoctoral researcher, Université libre de Bruxelles
1 jan 1999 → 31 dec 1999Postdoctoral researcher, Biotechnology Research Institute, National Research Council, Montreal
1 jan 1997 → 31 dec 1998Vingerafdruk
Verdiep u in de onderzoeksgebieden waarop Wim Vranken actief is. Deze onderwerplabels komen uit het werk van deze persoon. Samen vormen ze een unieke vingerafdruk.
- 6 Soortgelijke profielen
Netwerk
Recente externe samenwerking op landenniveau. Duik in de details door op de stippen te klikken.
Projecten
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EUAR56: Horizon 2020: HosmartAI: Ziekenhuis Slimme ontwikkeling op basis van AI
Vranken, W., Schoors, D. & De Canck, H.
1/01/21 → 31/05/24
Project: Fundamenteel
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OZR3719: Bilateral cooperation within the framework of a joint doctoral project: benchfee for joint PhD VUB - UGent, DIXIT Bhawna
27/10/20 → 26/10/24
Project: Fundamenteel
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OZR3588: Financiering FWO Hercules: ERA platform: Uitgebreid RNA Analyse platform - versie 2.0
Rooman, I., Bouwens, L., Heimberg, H., Neyns, B., Vranken, W., Vanhaecke, T., Massie, A., van Grunsven, L., De Bruyne, E., De Bundel, D., Forsyth, R., Breckpot, K., Van Dooren, S., De Kock, J., Njemini, R. & Laoui, D.
1/05/20 → 30/04/24
Project: Fundamenteel
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IRP20: TumorScope: VUB en UZ Brussel expertise als hefboom naar een onderzoeksplatform voor digitale gezondheid.
Vranken, W., Vandemeulebroucke, J., Cornu, P., Forsyth, R., Quinn, P. & Van Dooren, S.
1/11/19 → 31/10/24
Project: Fundamenteel
Onderzoeksoutput
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b2bTools: online predictions for protein biophysical features and their conservation
Kagami, L. P., Orlando, G., Raimondi, D., Ancien, F., Dixit, B., Gavaldá-García, J., Ramasamy, P., Roca-Martínez, J., Tzavella, K. & Vranken, W., 31 mei 2021, In : Nucleic Acids Research. 2021, gkab425, 8 blz.Onderzoeksoutput: Article
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Computational resources for identifying and describing proteins driving liquid-liquid phase separation
Pancsa, R., Vranken, W. & Mészáros, B., 1 feb 2021, In : Briefings in Bioinformatics.Onderzoeksoutput: Article
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Critical assessment of protein intrinsic disorder prediction
CAID Predictors & DisProt Curators, mei 2021, In : Nature Methods. 18, 5, blz. 472-481 10 blz.Onderzoeksoutput: Article
Open Access1 Citaat (Scopus) -
Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM
Uchański, T., Masiulis, S., Fischer, B., Kalichuk, V., López-Sánchez, U., Zarkadas, E., Weckener, M., Sente, A., Ward, P., Wohlkönig, A., Zögg, T., Remaut, H., Naismith, J. H., Nury, H., Vranken, W., Aricescu, A. R., Pardon, E. & Steyaert, J., jan 2021, In : Nature Methods. 18, 1, blz. 60-68 9 blz.Onderzoeksoutput: Article
7 Citaten (Scopus) -
MobiDB: intrinsically disordered proteins in 2021
Piovesan, D., Necci, M., Escobedo, N., Monzon, A. M., Hatos, A., Micetic, I., Quaglia, F., Paladin, L., Ramasamy, P., Dosztanyi, Z., Vranken, W. F., Davey, N. E., Parisi, G., Fuxreiter, M. & Tosatto, S. C. E., 8 jan 2021, In : Nucleic Acids Research. 49, D1, blz. D361-D367 7 blz.Onderzoeksoutput: Article
3 Citaten (Scopus)
Activiteiten
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Vrije Universiteit Amsterdam (Externe Organisatie)
Wim Vranken (Examiner)7 jan 2021Activiteit: Membership of peer-review panel or committee
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Intrinsically disordered proteins and phase separation, lecture and practical
Wim Vranken (Speaker)30 jan 2020Activiteit: Talk or presentation at a workshop/seminar
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Leveraging the biophysical context of amino acid residues to understand protein behaviour
Wim Vranken (Speaker)13 feb 2020Activiteit: Talk or presentation at a conference
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KU Leuven (Externe Organisatie)
Wim Vranken (Examiner)15 jan 2020Activiteit: Membership of peer-review panel or committee
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ELIXIR IDP community (Externe Organisatie)
Wim Vranken (Chair)12 aug 2020Activiteit: Membership of public/government advisory/policy group or panel
Scriptie
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Exploring the conformations and interactions in peptides with quantum mechanical methodology
Auteur: Alonso Giner, M., De Proft, F., Vranken, W., Oomen, J. & Ballet, S., feb 2017Begeleider: Alonso Giner, M. (Promotor), De Proft, F. (Promotor), Vranken, W. (Promotor) & Ballet, S. (Jury)
Scriptie/masterproef: Master's Thesis
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Identification and characterization of putative transcriptional regulators in archaea
Auteur: Donvil, L., Peeters, E. & Vranken, W., 10 sep 2018Begeleider: Orlando, G. (Advisor), de Buyl, S. (Jury) & De Greve, H. (Jury)
Scriptie/masterproef: Master's Thesis
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Self-labeling Grey-Box Model: An Interpretable Semi-Supervised Classifier
Auteur: Grau, I., 9 okt 2020Begeleider: Nowe, A. (Promotor), García Lorenzo, M. M. (Externe persoon) (Co-promotor), Signer, B. (Jury), Vranken, W. (Jury), Lenaerts, T. (Jury), Van Dooren, S. (Jury), Vanhoof, K. (Externe persoon) (Jury) & Cornelis, C. (Externe persoon) (Jury)
Scriptie/masterproef: Doctoral Thesis
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The effect of genome variation on human proteins: understanding variants and improving their deleteriousness prediction through extensive contextualisation
Auteur: Raimondi, D. & Vranken, W., 5 mei 2017Begeleider: Lenaerts, T. (Externe persoon) (Promotor)
Scriptie/masterproef: Doctoral Thesis
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The role of dynamics in emergent protein properties
Auteur: Vranken, W., Orlando, G. & Lenaerts, T., 23 mei 2019Scriptie/masterproef: Doctoral Thesis